feat(scripts): add incremental update system with version tracking and diff utilities
Add complete incremental update infrastructure: - VERSION: project version tracking file - scripts/version_utils.py: shared version parsing and comparison utilities - scripts/build_update.py: build incremental update package from git diff - scripts/apply_update.py: apply offline incremental update - scripts/merge_config.py: safe config merge logic for update safety - scripts/migrate_db_to_appdata.py: migrate DB from project dir to APPDATA Ultraworked with [Sisyphus](https://github.com/code-yeongyu/oh-my-openagent) Co-authored-by: Sisyphus <clio-agent@sisyphuslabs.ai>
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PM-pinou